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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8873362_8874553_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8873362 - 8874553

Intron Length:

1192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAACTTAA

5'SS Class:

major

3'SS Sequence:

TTCTATCTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATCTTAAAA

Flanking Amino Acid:

VVDGQVRIKPIHVNPCFYQS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

71.5

36.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.5

0.71

0.8

32.3

Minor 5ss

45.5

-0.5

2.6

58.4

46.2

Minor BPS

67.7

0.55

1.4

74.32

36.5

Associated Gene:

Gene:

APLF

Ensembl Gene ID:

ENSAPLG00000009117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009492

8852079 - 8874658

22580