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Intron Name: Anas_platyrhynchos_platyrhynchos_3_88747363_88769058_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88747363 - 88769058

Intron Length:

21696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

ACTATTTTACAC

Flanking Amino Acid:

LGTTGTYCEQGDFLCISLVN

Intron Amino Acid Position:

1055

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

75.9

35.2

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

85.1

0.79

0.8

32.2

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

46.7

-0.2

1.7

53.71

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001025

88746161 - 89190405

444245