Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_88783022_88783227_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88783022 - 88783227

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTATTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TTTGTTGTAACA

Flanking Amino Acid:

GRYHQKGWLKVDDQKNKTVT

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

74.5

0.61

79.6

29.1

Major PPT

61.9

0.27

1.2

63.6

41.2

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

55.9

0.18

2.1

73.92

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001025

88746161 - 89190405

444245