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Intron Name: Anas_platyrhynchos_platyrhynchos_3_88982014_89013566_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88982014 - 89013566

Intron Length:

31553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

ACAAGCATAAGA

Flanking Amino Acid:

GLPHPYATKQIPGPVYNFTG

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

82.4

30.8

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

87.6

0.85

0.6

84.4

23.5

Minor 5ss

58.1

0.27

2.3

39.6

Minor BPS

-0.6

2.1

48.2

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001025

88746161 - 89190405

444245