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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8901210_8902440_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8901210 - 8902440

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTTCT

5'SS Class:

major

3'SS Sequence:

TTTTTATGCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTGCTAACA

Flanking Amino Acid:

SIRLPETINLSALYLSMKDP

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

75.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.6

0.69

0.9

76.6

36.5

Minor 5ss

45.3

-0.5

2.4

60.2

44.2

Minor BPS

51.7

0.05

2.3

72.9

38.8

Associated Gene:

Gene:

PLEK

Ensembl Gene ID:

ENSAPLG00000009140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021949

8895270 - 8929397

34128

ENSAPLT00000018726

8894469 - 8912153

17685

ENSAPLT00000047323

8894469 - 8912153

17685

ENSAPLT00000009538

8895270 - 8948071

52802

ENSAPLT00000036791

8894267 - 8915631

21365

ENSAPLT00000023990

8894267 - 8941285

47019