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Intron Name: Anas_platyrhynchos_platyrhynchos_3_89123286_89189965_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89123286 - 89189965

Intron Length:

66680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTATTTGCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTATGCATAATG

Flanking Amino Acid:

ADGPGRTFHCRCLAGFSGQF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

1.1

79.1

36.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

83.3

0.75

0.9

81.5

Minor 5ss

31.4

-2.1

2.4

33.7

41.6

Minor BPS

52.6

-0

2.1

65.19

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001025

88746161 - 89190405

444245