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Intron Name: Anas_platyrhynchos_platyrhynchos_3_89582004_89585700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89582004 - 89585700

Intron Length:

3697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CATGTATCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

TTTTCTGCATGT

Flanking Amino Acid:

FLCECDKGFTAYMFIFSTG*

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

68.8

0.42

0.9

59.4

41.7

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

43.2

-0.4

2.5

71.47

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003028

89581975 - 89666390

84416