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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8987003_8988311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8987003 - 8988311

Intron Length:

1309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

GTTTTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CAATTCTTACCT

Flanking Amino Acid:

GRISFEEFCAVVGGLDIHKK

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

74.7

35.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

84.6

0.78

0.8

77.2

37.1

Minor 5ss

38.9

-1.2

2.8

55.7

41.6

Minor BPS

61.6

0.44

1.7

73.36

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018180

8953270 - 8990488

37219