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Intron Name: Anas_platyrhynchos_platyrhynchos_3_89899360_89904827_F

Intron Information:

Intron Rank:

142072

Intron Class:

major

Intron Phase:

Intron Coordinates:

89899360 - 89904827

Intron Length:

5468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

34.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

96.3

1.04

0.5

92.6

17.2

Minor 5ss

34.9

-1.7

3.3

49.9

46.4

Minor BPS

59.2

0.37

1.5

73.08

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021489

89895416 - 89904868

9453