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Intron Name: Anas_platyrhynchos_platyrhynchos_3_9080586_9084219_F

Intron Information:

Intron Rank:

143740

Intron Class:

major

Intron Phase:

Intron Coordinates:

9080586 - 9084219

Intron Length:

3634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

37.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

91.2

0.93

0.6

85.4

29.4

Minor 5ss

31.6

-2.1

3.2

41.1

45.6

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028701

9069340 - 9085783

16444