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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_91089595_91097037_F

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
91089595 - 91097037
Intron Length:
7443

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAGTGTTA
5'SS Class:
major
3'SS Sequence:
TGGTTTGTTGCAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTAAAAT
U12 Branch Point Sequence:
TTCTGGTTAAAA
Flanking Amino Acid:
RVCNNTALCPVHGVWEEWSP
Intron Amino Acid Position:
343

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
71.7
0.51
1.1
68.5
38.9
Major BPS
70.6
0.51
1.1
75.9
34.4
Major PPT
78.6
0.64
1
72.9
42.2
Minor 5ss
39
-1.2
3.6
55.3
48.9
Minor BPS
48.4
-0.1
2.5
68.09
44.4

Associated Gene:

Gene:
ADGRB3
Ensembl Gene ID:
ENSAPLG00000016368
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000028981
90889234 - 91363402
474169
ENSAPLT00000021656
90889234 - 91363402
474169
ENSAPLT00000017089
90891823 - 91363402
471580
ENSAPLT00000035142
90889234 - 91363402
474169