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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_91175138_91181048_F

Intron Information:

Intron Rank:
14
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
91175138 - 91181048
Intron Length:
5911

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAT|GTAAGTACA
5'SS Class:
strong_major
3'SS Sequence:
GTTTGCTTTTCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
AACTAAT
U12 Branch Point Sequence:
ATACCAGTAACT
Flanking Amino Acid:
LEIELAHLSNGTLNPYCVLW
Intron Amino Acid Position:
811

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.1
0.83
1
82.7
29.2
Major BPS
77.9
0.69
0.8
75.9
25
Major PPT
84.4
0.77
0.8
81
36.6
Minor 5ss
38.4
-1.3
2.7
48.5
40.3
Minor BPS
49.6
0.05
2.2
74.5
41.5

Associated Gene:

Gene:
ADGRB3
Ensembl Gene ID:
ENSAPLG00000016368
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000028981
90889234 - 91363402
474169
ENSAPLT00000021656
90889234 - 91363402
474169
ENSAPLT00000017089
90891823 - 91363402
471580
ENSAPLT00000035142
90889234 - 91363402
474169