About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_91326175_91328416_F

Intron Information:

Intron Rank:
21
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
91326175 - 91328416
Intron Length:
2242

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TTG|GTAAACATT
5'SS Class:
major
3'SS Sequence:
TTTTGTTTGACAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TGTTCAT
U12 Branch Point Sequence:
TTTTGTTTGACA
Flanking Amino Acid:
FVGPAAAVVLVNMVIGILVF
Intron Amino Acid Position:
1033

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.9
0.61
1
76.9
38.1
Major BPS
84.8
0.86
1
85.7
34.9
Major PPT
82.7
0.74
1
79.9
37.7
Minor 5ss
44.8
-0.6
3.1
63
42.8
Minor BPS
69.2
0.6
1.7
81.99
33.2

Associated Gene:

Gene:
ADGRB3
Ensembl Gene ID:
ENSAPLG00000016368
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000017089
90891823 - 91363402
471580
ENSAPLT00000035142
90889234 - 91363402
474169
ENSAPLT00000028981
90889234 - 91363402
474169
ENSAPLT00000021656
90889234 - 91363402
474169