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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_91343415_91354274_F

Intron Information:

Intron Rank:
28
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
91343415 - 91354274
Intron Length:
10860

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTCAGTGAC
5'SS Class:
strong_major
3'SS Sequence:
TACTGCTTAATAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTTAC
U12 Branch Point Sequence:
TTCTTTTTTACT
Flanking Amino Acid:
GSTISMSSLERRKSRYSDLD
Intron Amino Acid Position:
1412

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
80.9
0.73
1.2
75.8
34.3
Major BPS
86.6
0.91
0.8
77.7
36.7
Major PPT
67
0.38
0.9
62.3
38.3
Minor 5ss
28.4
-2.5
3
34.8
41.6
Minor BPS
67.1
0.62
1.6
82.96
38.5

Associated Gene:

Gene:
ADGRB3
Ensembl Gene ID:
ENSAPLG00000016368
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000035142
90889234 - 91363402
474169
ENSAPLT00000028981
90889234 - 91363402
474169
ENSAPLT00000021656
90889234 - 91363402
474169