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Intron Name: Anas_platyrhynchos_platyrhynchos_3_91506596_91507296_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
91506596 - 91507296

Intron Length:
701

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCA|GTAAGTGTA

5'SS Class:
major

3'SS Sequence:
TTTTAATATACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTCTTTTTAATA

Flanking Amino Acid:
KEEDDGNTCSQVKTALKYTL

Intron Amino Acid Position:
133

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78
0.66
1
75.6
34.3

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
79.9
0.67
0.9
74.1
39.5

Minor 5ss
38.5
-1.3
3.3
54.7
43.6

Minor BPS
75.4
0.79
1.1
78
33.3

Associated Gene:

Gene:
LMBRD1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

91452587 - 91526046
73460