Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_91839802_91856827_F

Intron Information:

Intron Rank:

146043

Intron Class:

major

Intron Phase:

Intron Coordinates:

91839802 - 91856827

Intron Length:

17026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

87.7

Major BPS

76.9

0.67

66.3

40.4

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

32.8

-2

3.3

47.8

47.9

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043267

91839749 - 91857869

18121