About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_91856931_91857804_F


Intron Information:

Intron Rank:
146044

Intron Class:
major

Intron Phase:

Intron Coordinates:
91856931 - 91857804

Intron Length:
874

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGTGGG

5'SS Class:
strong_major

3'SS Sequence:
TTGGATTATACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAC

U12 Branch Point Sequence:
CCTTCTTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.3
1.02
0.8
76.2
39.9

Major BPS
77.7
0.69
1
81
30.2

Major PPT
71.9
0.49
1
65.5
44.4

Minor 5ss
32.1
-2
3.1
40.6
45.6

Minor BPS
65.7
0.57
1.8
78.9
44

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

91839749 - 91857869
18121

91839749 - 91857869
18121