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Intron Name: Anas_platyrhynchos_platyrhynchos_3_91936420_91942947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

91936420 - 91942947

Intron Length:

6528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGGATCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TTAGCTCTAACA

Flanking Amino Acid:

LLAQEHHTLRVRRFAEAFFC

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

76.6

0.6

69.8

41.2

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

0.31

1.8

72.79

39.1

Associated Gene:

Gene:

FAM135A

Ensembl Gene ID:

ENSAPLG00000012238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012760

91906928 - 91968806

61879

ENSAPLT00000044443

91906928 - 91970064

63137

ENSAPLT00000036726

91906928 - 91972493

65566

ENSAPLT00000026571

91903218 - 91968806

65589