Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_91973653_91975577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

91973653 - 91975577

Intron Length:

1925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

ATTCATTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTACATTACAC

Flanking Amino Acid:

RLLRGAAGAARSSVLCSSLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.1

55.6

42.5

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

73.3

0.52

68.9

41.1

Minor 5ss

38.9

-1.3

3.4

55.5

43.2

Minor BPS

50.7

69.98

40.7

Associated Gene:

Gene:

SDHAF4

Ensembl Gene ID:

ENSAPLG00000012169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012662

91973601 - 91978319

4719