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Intron Name: Anas_platyrhynchos_platyrhynchos_3_92021091_92036341_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92021091 - 92036341

Intron Length:

15251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTATTTTGTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTTCCTCTATT

Flanking Amino Acid:

YDKNAVNTFNISSSDTAQPL

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

80.2

0.68

0.9

75.7

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

60.6

0.41

1.9

80.22

41.9

Associated Gene:

Gene:

SMAP1

Ensembl Gene ID:

ENSAPLG00000012058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047327

91999432 - 92084473

85042

ENSAPLT00000034391

91999432 - 92084473

85042

ENSAPLT00000012560

91999432 - 92084686

85255