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Intron Name: Anas_platyrhynchos_platyrhynchos_3_92061846_92069926_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92061846 - 92069926

Intron Length:

8081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTCACTTTAAAT

Flanking Amino Acid:

SEPTIDLLGLDGPAEASVTN

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

79.7

35.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

78.2

0.64

83.1

32.3

Minor 5ss

41.2

-1

2.9

54.5

43.9

Minor BPS

69.7

0.7

1.4

81.86

39.5

Associated Gene:

Gene:

SMAP1

Ensembl Gene ID:

ENSAPLG00000012058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039629

91999432 - 92084473

85042

ENSAPLT00000034391

91999432 - 92084473

85042

ENSAPLT00000012560

91999432 - 92084686

85255

ENSAPLT00000047327

91999432 - 92084473

85042