Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_92132062_92135197_F

Intron Information:

Intron Rank:

129218

Intron Class:

major

Intron Phase:

Intron Coordinates:

92132062 - 92135197

Intron Length:

3136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TCTTGTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

86.6

0.82

0.8

80.7

35.9

Minor 5ss

38.7

-1.3

3.1

51.6

45.2

Minor BPS

54.2

0.21

74.81

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045567

92129394 - 92137466

8073