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Intron Name: Anas_platyrhynchos_platyrhynchos_3_92230144_92230282_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
92230144 - 92230282

Intron Length:
139

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAATACAA

5'SS Class:
major

3'SS Sequence:
CTTTGTTTATTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGGAT

U12 Branch Point Sequence:
TCTTTGTTTATT

Flanking Amino Acid:
AKELTTYEIEEFKKTKEAIR

Intron Amino Acid Position:
380

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.71
1
69.7
36.3

Major BPS
71.4
0.53
1.4
71.4
45.1

Major PPT
77.6
0.62
0.9
78
35.1

Minor 5ss
31.3
-2.1
3
39.2
46

Minor BPS
49.6
0.05
2.3
74.69
42.7

Associated Gene:

Gene:
OGFRL1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

92227647 - 92236787
9141