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Intron Name: Anas_platyrhynchos_platyrhynchos_3_92522254_92523809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

92522254 - 92523809

Intron Length:

1556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGGAT

U12 Branch Point Sequence:

CTTCCTTGGATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

83.8

34.5

Major BPS

59.1

0.23

1.4

60.7

45.9

Major PPT

66.5

0.37

67.1

33.2

Minor 5ss

42.6

-0.8

3.1

63.9

40.4

Minor BPS

49.6

-0.1

1.6

56.17

39.8

Associated Gene:

Gene:

RIMS1

Ensembl Gene ID:

ENSAPLG00000010534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043843

92522040 - 92717715

195676

ENSAPLT00000010966

92522040 - 92717715

195676