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Intron Name: Anas_platyrhynchos_platyrhynchos_3_92576663_92577384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92576663 - 92577384

Intron Length:

722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TTCTTTTCAATA

Flanking Amino Acid:

HSRETSPISSHPVTWQPSKE

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.5

34.4

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

79.5

0.66

0.8

77.6

29.7

Minor 5ss

34.3

-1.8

44.8

42.9

Minor BPS

61.9

0.37

1.5

70.41

36.7

Associated Gene:

Gene:

RIMS1

Ensembl Gene ID:

ENSAPLG00000010534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020705

92546488 - 92717715

171228

ENSAPLT00000010966

92522040 - 92717715

195676

ENSAPLT00000043843

92522040 - 92717715

195676

ENSAPLT00000025216

92546488 - 92717715

171228