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Intron Name: Anas_platyrhynchos_platyrhynchos_3_92579714_92583612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92579714 - 92583612

Intron Length:

3899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTAAATTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTCTCTTTAAAT

Flanking Amino Acid:

LADVVGHLRAGDEVLEWNGK

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

76.5

34.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

65.5

0.35

1.1

61.8

42.4

Minor 5ss

32.9

-2

40.7

45.5

Minor BPS

78.4

0.97

1.3

88.96

35.8

Associated Gene:

Gene:

RIMS1

Ensembl Gene ID:

ENSAPLG00000010534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043843

92522040 - 92717715

195676

ENSAPLT00000025216

92546488 - 92717715

171228

ENSAPLT00000020705

92546488 - 92717715

171228

ENSAPLT00000010966

92522040 - 92717715

195676