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Intron Name: Anas_platyrhynchos_platyrhynchos_3_92593809_92595401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92593809 - 92595401

Intron Length:

1593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTCCA

5'SS Class:

major

3'SS Sequence:

TACTGTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TTTACCTTACTG

Flanking Amino Acid:

GGESSSKKLQRSRPISDSDI

Intron Amino Acid Position:

652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

65.3

40.7

Major BPS

71.4

0.53

1.1

63.4

Major PPT

74.1

0.54

68.8

41.6

Minor 5ss

34.8

-1.7

3.1

41.9

38.7

Minor BPS

65.5

0.35

1.7

71.97

41.2

Associated Gene:

Gene:

RIMS1

Ensembl Gene ID:

ENSAPLG00000010534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020705

92546488 - 92717715

171228

ENSAPLT00000010966

92522040 - 92717715

195676

ENSAPLT00000043843

92522040 - 92717715

195676

ENSAPLT00000025216

92546488 - 92717715

171228