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Intron Name: Anas_platyrhynchos_platyrhynchos_3_92617564_92625025_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92617564 - 92625025

Intron Length:

7462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTAGGC

5'SS Class:

major

3'SS Sequence:

TGTCATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CTTTTCTGACAT

Flanking Amino Acid:

HIEHASPEDDRQSRKVERYS

Intron Amino Acid Position:

848

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

57.3

40.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

82.5

0.73

0.9

37.6

Minor 5ss

29.8

-2.3

3.5

42.4

44.4

Minor BPS

51.3

0.12

1.9

73.47

43.3

Associated Gene:

Gene:

RIMS1

Ensembl Gene ID:

ENSAPLG00000010534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020705

92546488 - 92717715

171228

ENSAPLT00000010966

92522040 - 92717715

195676