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Intron Name: Anas_platyrhynchos_platyrhynchos_3_92622859_92625025_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

92622859 - 92625025

Intron Length:

2167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCCTTA

5'SS Class:

weak_minor

3'SS Sequence:

TGTCATTTTACAG|G

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CTTTTCTGACAT

Flanking Amino Acid:

HLSAKPGAAQRQSRKVERYS

Intron Amino Acid Position:

846

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.2

67.6

40.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

82.5

0.73

0.9

37.6

Minor 5ss

81.6

1.07

1.5

82.1

37.9

Minor BPS

51.3

0.12

1.9

73.47

43.3

Associated Gene:

Gene:

RIMS1

Ensembl Gene ID:

ENSAPLG00000010534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025216

92546488 - 92717715

171228