Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_92781365_92781869_F

Intron Information:

Intron Rank:

145218

Intron Class:

major

Intron Phase:

Intron Coordinates:

92781365 - 92781869

Intron Length:

505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATGCTG

5'SS Class:

major

3'SS Sequence:

TAAATCCTCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

TTTTCTATATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

62.3

43.6

Major BPS

70.2

0.5

72.1

Major PPT

65.1

0.34

0.9

58.4

37.8

Minor 5ss

-2.4

3.3

38.2

46.7

Minor BPS

62.9

0.4

1.9

80.19

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020373

92780562 - 92782423

1862