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Intron Name: Anas_platyrhynchos_platyrhynchos_3_92805474_92813823_R

Intron Information:

Intron Rank:

135390

Intron Class:

major

Intron Phase:

Intron Coordinates:

92805474 - 92813823

Intron Length:

8350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGAAAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.27

1.2

64.9

39.6

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

70.4

0.64

1.5

81.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036918

92805237 - 92814190

8954