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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93136237_93136779_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
93136237 - 93136779

Intron Length:
543

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGACTTG

5'SS Class:
major

3'SS Sequence:
TGCTGTGCTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCAAAT

U12 Branch Point Sequence:
TATTCCATAAAA

Flanking Amino Acid:
REQALDDFKKGKVRILVATD

Intron Amino Acid Position:
471

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.6
0.49
1.1
63
44.1

Major BPS
68.5
0.46
1
73.3
28.9

Major PPT
69
0.43
0.9
65.8
41

Minor 5ss
45.4
-0.5
3.3
63.6
48.1

Minor BPS
68.1
0.57
1.7
79.56
35.5

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

93122884 - 93139051
16168