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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93145698_93146267_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
93145698 - 93146267

Intron Length:
570

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGTACT

5'SS Class:
strong_major

3'SS Sequence:
TTTTTGTTACTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAC

U12 Branch Point Sequence:
TTTTTGTTACTA

Flanking Amino Acid:
IIKEEVKNIKDVEVTVKRRK

Intron Amino Acid Position:
298

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
98.1
1.13
0.6
93.5
20.3

Major BPS
84.6
0.86
0.8
83.9
22.3

Major PPT
79.5
0.66
0.9
74.6
40

Minor 5ss
38.4
-1.3
2.8
52.3
44.3

Minor BPS
53.6
0.11
2.3
74.1
38.6

Associated Gene:

Gene:
CGAS

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

93142638 - 93147774
5137

93142638 - 93148108
5471

93143301 - 93147503
4203