Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_93154678_93154861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93154678 - 93154861

Intron Length:

184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTACGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

TTTAGGTTAACT

Flanking Amino Acid:

EKLSSNRPQTIGAVSRIPGI

Intron Amino Acid Position:

632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

72.7

38.8

Major BPS

61.6

0.29

1.4

63.4

Major PPT

0.59

70.4

40.2

Minor 5ss

-1.7

2.9

45.5

42.6

Minor BPS

56.2

0.27

2.5

84.56

42.1

Associated Gene:

Gene:

MTO1

Ensembl Gene ID:

ENSAPLG00000009903

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010326

93147481 - 93155483

8003