Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_93168062_93168194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93168062 - 93168194

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGAAA

5'SS Class:

major

3'SS Sequence:

TTCCTTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TCCTTTTCAAAG

Flanking Amino Acid:

IKNMITGTSQADCAVLIVAA

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

68.2

38.4

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

75.2

0.57

77.4

28.8

Minor 5ss

29.5

-2.3

3.4

38.5

46.8

Minor BPS

48.3

-0.2

1.7

51.7

43.3

Associated Gene:

Gene:

EEF1A1

Ensembl Gene ID:

ENSAPLG00000009349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026404

93165010 - 93169349

4340

ENSAPLT00000009802

93166010 - 93169397

3388