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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93245591_93249519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93245591 - 93249519

Intron Length:

3929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

GGATAATTAACG

Flanking Amino Acid:

DSFGTLVLPVLPLNSASGDY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

67.7

0.44

58.3

38.4

Major PPT

0.83

0.7

85.9

27.9

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

50.3

-0.1

1.9

56.9

43.3

Associated Gene:

Gene:

CD109

Ensembl Gene ID:

ENSAPLG00000007918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008257

93228019 - 93304474

76456