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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93282544_93284695_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93282544 - 93284695

Intron Length:

2152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTTAATTAACC

Flanking Amino Acid:

FGNEDPSGSTWLSAFVLRCF

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

0.43

67.6

32.8

Minor 5ss

37.6

-1.4

2.8

48.3

42.5

Minor BPS

67.2

0.52

1.8

79.62

34.4

Associated Gene:

Gene:

CD109

Ensembl Gene ID:

ENSAPLG00000007918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008257

93228019 - 93304474

76456