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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93286834_93289376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93286834 - 93289376

Intron Length:

2543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTCTCTCAACA

Flanking Amino Acid:

NHLGGFSSTQDTVVALQALS

Intron Amino Acid Position:

1175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

32.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

81.4

0.71

0.8

77.8

29.5

Minor 5ss

40.6

-1

3.1

57.9

46.2

Minor BPS

70.6

0.64

1.5

81.1

33.9

Associated Gene:

Gene:

CD109

Ensembl Gene ID:

ENSAPLG00000007918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008257

93228019 - 93304474

76456