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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93289533_93289621_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93289533 - 93289621

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGTAG

5'SS Class:

major

3'SS Sequence:

GTCTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTCGCTCATCT

Flanking Amino Acid:

QNRFLLQTKEVPPVQPMTVT

Intron Amino Acid Position:

1227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

59.6

41.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

82.6

0.73

0.7

81.2

30.9

Minor 5ss

35.1

-1.7

3.4

46.5

48.8

Minor BPS

49.5

0.04

2.2

77.9

44.1

Associated Gene:

Gene:

CD109

Ensembl Gene ID:

ENSAPLG00000007918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008257

93228019 - 93304474

76456