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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93297144_93300943_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

93297144 - 93300943

Intron Length:

3800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTATTTTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TCTACTAAAATT

Flanking Amino Acid:

MNHLTLNVCTRYLGSGAAPS

Intron Amino Acid Position:

1294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

57.8

0.18

1.2

60.5

43.9

Minor 5ss

-1.6

3.1

50.1

46.4

Minor BPS

48.1

-0

1.9

68.97

42.6

Associated Gene:

Gene:

CD109

Ensembl Gene ID:

ENSAPLG00000007918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008257

93228019 - 93304474

76456