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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_93415344_93421827_F

Intron Information:

Intron Rank:
128681
Intron Class:
major
Intron Phase:
Intron Coordinates:
93415344 - 93421827
Intron Length:
6484

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TTG|GTAAACAGA
5'SS Class:
major
3'SS Sequence:
TTTTGTTAAGCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTGAT
U12 Branch Point Sequence:
TTTTTCTGATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
72.3
0.53
1.1
64
41.9
Major BPS
91.3
1.03
0.7
79.6
35.6
Major PPT
77.3
0.62
1
74.8
39
Minor 5ss
38.2
-1.3
3
45.8
44.3
Minor BPS
64
0.52
1.7
84.31
36.7

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000019271
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000034529
93414885 - 93424133
9249