Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_93703478_93705941_R

Intron Information:

Intron Rank:

151755

Intron Class:

major

Intron Phase:

Intron Coordinates:

93703478 - 93705941

Intron Length:

2464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACATTA

5'SS Class:

major

3'SS Sequence:

TTCTTGGACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

CTTTCTTGGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.1

77.8

33.3

Major BPS

62.7

0.32

1.4

63.4

Major PPT

69.9

0.45

64.5

40.6

Minor 5ss

47.1

-0.3

2.9

65.1

46.1

Minor BPS

65.9

0.49

1.5

74.8

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023827

93703067 - 93706731

3665

ENSAPLT00000019410

93703067 - 93707488

4422