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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93874827_93874934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93874827 - 93874934

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TTTGATTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGTTTTTGATT

Flanking Amino Acid:

PGMKGEKGDRGDIASQNMMR

Intron Amino Acid Position:

2852

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.4

45.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

75.9

0.58

0.9

74.5

40.1

Minor 5ss

39.1

-1.2

46.9

42.4

Minor BPS

70.3

0.72

1.1

81.5

34.7

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577