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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93874971_93879584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93874971 - 93879584

Intron Length:

4614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGATAA

5'SS Class:

major

3'SS Sequence:

ATATTTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTATATTTATTT

Flanking Amino Acid:

PGKPGDRGTPGSPGMKGEKG

Intron Amino Acid Position:

2840

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

33.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

77.2

0.61

0.9

75.4

38.7

Minor 5ss

39.4

-1.2

3.1

52.9

44.9

Minor BPS

51.6

0.13

1.8

69.24

42.2

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577