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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93879710_93884477_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

93879710 - 93884477

Intron Length:

4768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGGGTAAC

5'SS Class:

weak_major

3'SS Sequence:

TCTTTCTTATCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TCTTTCTTATCA

Flanking Amino Acid:

PGEPVSGNFEPCRPLCVSTI

Intron Amino Acid Position:

2798

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.4

59.3

41.8

Major BPS

69.5

0.48

73.5

28.6

Major PPT

85.2

0.79

0.8

85.6

27.4

Minor 5ss

30.1

-2.3

2.9

31.1

35.8

Minor BPS

70.9

0.65

1.6

78.51

38.5

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577