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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93888404_93893641_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93888404 - 93893641

Intron Length:

5238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGAT

5'SS Class:

strong_major

3'SS Sequence:

AACTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTTTTCTCACAT

Flanking Amino Acid:

KKIFYGSFHKVHIVVTSSSV

Intron Amino Acid Position:

2646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.4

34.2

Major BPS

81.9

0.79

0.8

81.9

Major PPT

83.5

0.75

0.8

35.7

Minor 5ss

30.2

-2.3

3.7

45.9

49.3

Minor BPS

56.6

0.29

1.9

81.14

40.4

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577