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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93894362_93896856_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93894362 - 93896856

Intron Length:

2495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTCTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

ATTGTCTTAACA

Flanking Amino Acid:

HKNAFVSQPIREIHPEGLPQ

Intron Amino Acid Position:

2561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

83.6

29.8

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

75.3

0.57

70.3

39.6

Minor 5ss

35.5

-1.6

2.7

43.1

43.9

Minor BPS

76.5

0.83

1.3

81.19

34.3

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577