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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93898182_93900442_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93898182 - 93900442

Intron Length:

2261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTATTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTTACTACAATC

Flanking Amino Acid:

RKAATVIQHSGFSVFVVGVA

Intron Amino Acid Position:

2447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

79.7

35.3

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

81.8

0.71

0.8

76.6

37.5

Minor 5ss

41.2

-1

2.9

54.5

43.9

Minor BPS

50.5

-0

1.8

68.42

37.1

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577