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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93900587_93900785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93900587 - 93900785

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCTG

5'SS Class:

strong_major

3'SS Sequence:

ATGCACTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

GACTCATTCATT

Flanking Amino Acid:

IQYRGGNTRTGKALTFIKEK

Intron Amino Acid Position:

2399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

74.6

41.7

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

73.5

0.53

66.1

39.9

Minor 5ss

37.9

-1.4

50.1

46.1

Minor BPS

49.1

0.01

43.7

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577