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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93900910_93901520_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93900910 - 93901520

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TATTCCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGTGACTGAATA

Flanking Amino Acid:

FDLINPAGIQVSFVQYSDEA

Intron Amino Acid Position:

2358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

78.8

38.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.72

0.8

78.6

29.9

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

53.2

0.1

1.7

66.19

40.1

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577